MaghrebDataLibMedV2, Main, Exploration, bibRecord, 000306

Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database.

Identifieur interne : 000306 ( Main/Exploration ); précédent : 000305; suivant : 000307

Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database.

Auteurs : Raquel Cabezas Silva [Portugal] ; Teresa Ribeiro [Portugal] ; Isabel Lucas [Portugal] ; Maria João Porto [Portugal] ; Jorge Costa Santos [Portugal] ; Paulo Dario [Portugal]

Source :

Forensic science international. Genetics [ 1878-0326 ] ; 2016.

RBID : pubmed:26651434

Descripteurs français

English descriptors

KwdEn :
- Databases, Genetic (MeSH), Forensic Genetics (methods), Gene Frequency (MeSH), Genetic Variation (MeSH), Genetics, Population (methods), Humans (MeSH), Microsatellite Repeats (MeSH), Phylogeny (MeSH), Polymerase Chain Reaction (MeSH), Portugal (MeSH), Reference Values (MeSH).
MESH :
- methods : Forensic Genetics, Genetics, Population.
- Databases, Genetic, Gene Frequency, Genetic Variation, Humans, Microsatellite Repeats, Phylogeny, Polymerase Chain Reaction, Portugal, Reference Values.

Abstract

The main objective of this work consisted of the updating of allele frequencies and other relevant forensic parameters for the 17 autosomal STR loci provided by the combination of the two types of kits used routinely in our laboratory casework: AmpF/STR Identifiler(®) and the Powerplex(®) 16 Systems. This aim was of significant importance, given that the last study on these kits within the southern Portuguese population dates back to 2006, and, as a consequence, it was necessary to correct the deviation caused by population evolution over the last ten years so that they might be better applied to our forensic casework. For this reason genetic data from 5362 unrelated Caucasian Portuguese individuals from the south of Portugal who were involved in paternity testing casework from 2005 to 2014 was used. Of all the markers, TPOX proved to be the least polymorphic, and Penta E the most. Secondly, this up-to-date southern Portuguese population was compared not only with the northern and central Portuguese populations, but also with that of southern Portugal in 2006, along with populations from Spain, Italy, Greece, Romania, Morocco, Angola and Korea in order to infer information about the relatedness of these respective populations, and the variation of the southern Portuguese population over time.

DOI: 10.1016/j.fsigen.2015.11.007
PubMed: 26651434

Affiliations:

Portugal

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Le document en format XML

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<term>Genetic Variation (MeSH)</term>
<term>Genetics, Population (methods)</term>
<term>Humans (MeSH)</term>
<term>Microsatellite Repeats (MeSH)</term>
<term>Phylogeny (MeSH)</term>
<term>Polymerase Chain Reaction (MeSH)</term>
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<term>Génétique légale (méthodes)</term>
<term>Humains (MeSH)</term>
<term>Phylogenèse (MeSH)</term>
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<term>Réaction de polymérisation en chaîne (MeSH)</term>
<term>Répétitions microsatellites (MeSH)</term>
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<term>Gene Frequency</term>
<term>Genetic Variation</term>
<term>Humans</term>
<term>Microsatellite Repeats</term>
<term>Phylogeny</term>
<term>Polymerase Chain Reaction</term>
<term>Portugal</term>
<term>Reference Values</term>
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<term>Fréquence d'allèle</term>
<term>Humains</term>
<term>Phylogenèse</term>
<term>Portugal</term>
<term>Réaction de polymérisation en chaîne</term>
<term>Répétitions microsatellites</term>
<term>Valeurs de référence</term>
<term>Variation génétique</term>
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<front><div type="abstract" xml:lang="en">The main objective of this work consisted of the updating of allele frequencies and other relevant forensic parameters for the 17 autosomal STR loci provided by the combination of the two types of kits used routinely in our laboratory casework: AmpF/STR Identifiler(®) and the Powerplex(®) 16 Systems. This aim was of significant importance, given that the last study on these kits within the southern Portuguese population dates back to 2006, and, as a consequence, it was necessary to correct the deviation caused by population evolution over the last ten years so that they might be better applied to our forensic casework. For this reason genetic data from 5362 unrelated Caucasian Portuguese individuals from the south of Portugal who were involved in paternity testing casework from 2005 to 2014 was used. Of all the markers, TPOX proved to be the least polymorphic, and Penta E the most. Secondly, this up-to-date southern Portuguese population was compared not only with the northern and central Portuguese populations, but also with that of southern Portugal in 2006, along with populations from Spain, Italy, Greece, Romania, Morocco, Angola and Korea in order to infer information about the relatedness of these respective populations, and the variation of the southern Portuguese population over time. </div>
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<tree><country name="Portugal"><noRegion><name sortKey="Cabezas Silva, Raquel" sort="Cabezas Silva, Raquel" uniqKey="Cabezas Silva R" first="Raquel" last="Cabezas Silva">Raquel Cabezas Silva</name>
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<name sortKey="Costa Santos, Jorge" sort="Costa Santos, Jorge" uniqKey="Costa Santos J" first="Jorge" last="Costa Santos">Jorge Costa Santos</name>
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<name sortKey="Lucas, Isabel" sort="Lucas, Isabel" uniqKey="Lucas I" first="Isabel" last="Lucas">Isabel Lucas</name>
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<name sortKey="Ribeiro, Teresa" sort="Ribeiro, Teresa" uniqKey="Ribeiro T" first="Teresa" last="Ribeiro">Teresa Ribeiro</name>
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Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database.

Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki